A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets

BACKGROUND: Next generation sequencing (NGS) technologies can be applied in complex microbial ecosystems for metatranscriptome analysis by employing direct cDNA sequencing, which is known as RNA sequencing (RNA-seq). RNA-seq generates large datasets of great complexity, the comprehensive interpretat...

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Hlavní autoři: Leimena, Milkha M, Ramiro-Garcia, Javier, Davids, Mark, van den Bogert, Bartholomeus, Smidt, Hauke, Smid, Eddy J, Boekhorst, Jos, Zoetendal, Erwin G, Schaap, Peter J, Kleerebezem, Michiel
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2013
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Research Article
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3750648/
https://ncbi.nlm.nih.gov/pubmed/23915218
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-14-530
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