Effect of Nickel and Cobalt on Methanogenic Enrichment Cultures and Role of Biogenic Sulfide in Metal Toxicity Attenuation

Por Paulo, Lara M., Ramiro-Garcia, Javier, van Mourik, Simon, Stams, Alfons J. M., Sousa, Diana Z.
Publicado no Front Microbiol (2017)

Dechlorination of three tetrachlorobenzene isomers by contaminated harbor sludge-derived enrichment cultures follows thermodynamically favorable reactions

Por Lu, Yue, Ramiro-Garcia, Javier, Vandermeeren, Pieter, Herrmann, Steffi, Cichocka, Danuta, Springael, Dirk, Atashgahi, Siavash, Smidt, Hauke
Publicado no Appl Microbiol Biotechnol (2016)

Probiotic legacy effects on gut microbial assembly in tilapia larvae

Por Giatsis, Christos, Sipkema, Detmer, Ramiro-Garcia, Javier, Bacanu, Gianina M., Abernathy, Jason, Verreth, Johan, Smidt, Hauke, Verdegem, Marc
Publicado no Sci Rep (2016)

Growth and activity of ANME clades with different sulfate and sulfide concentrations in the presence of methane

Por Timmers, Peer H. A., Widjaja-Greefkes, H. C. A., Ramiro-Garcia, Javier, Plugge, Caroline M., Stams, Alfons J. M.
Publicado no Front Microbiol (2015)

NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

Por Ramiro-Garcia, Javier, Hermes, Gerben D. A., Giatsis, Christos, Sipkema, Detmer, Zoetendal, Erwin G., Schaap, Peter J., Smidt, Hauke
Publicado no F1000Res (2018)

Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment

Por Carrión, Ornella, Larke-Mejía, Nasmille L., Gibson, Lisa, Farhan Ul Haque, Muhammad, Ramiro-García, Javier, McGenity, Terry J., Murrell, J. Colin
Publicado no Microbiome (2018)

Microbial Community Redundancy and Resilience Underpins High-Rate Anaerobic Treatment of Dairy-Processing Wastewater at Ambient Temperatures

Por Paulo, Lara M., Castilla-Archilla, Juan, Ramiro-Garcia, Javier, Escamez-Picón, José Antonio, Hughes, Dermot, Mahony, Thérèse, Murray, Michael, Wilmes, Paul, O'Flaherty, Vincent
Publicado no Front Bioeng Biotechnol (2020)

A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets

Por Leimena, Milkha M, Ramiro-Garcia, Javier, Davids, Mark, van den Bogert, Bartholomeus, Smidt, Hauke, Smid, Eddy J, Boekhorst, Jos, Zoetendal, Erwin G, Schaap, Peter J, Kleerebezem, Michiel
Publicado em 2013

Dietary protein sources differentially affect microbiota, mTOR activity and transcription of mTOR signaling pathways in the small intestine

Por Kar, Soumya K., Jansman, Alfons J. M., Benis, Nirupama, Ramiro-Garcia, Javier, Schokker, Dirkjan, Kruijt, Leo, Stolte, Ellen H., Taverne-Thiele, Johanna J., Smits, Mari A., Wells, Jerry M.
Publicado no PLoS One (2017)

Metagenomic- and Cultivation-Based Exploration of Anaerobic Chloroform Biotransformation in Hypersaline Sediments as Natural Source of Chloromethanes

Por Peng, Peng, Lu, Yue, Bosma, Tom N.P., Nijenhuis, Ivonne, Nijsse, Bart, Shetty, Sudarshan A., Ruecker, Alexander, Umanets, Alexander, Ramiro-Garcia, Javier, Kappler, Andreas, Sipkema, Detmer, Smidt, Hauke, Atashgahi, Siavash
Publicado no Microorganisms (2020)

A novel biomarker panel for irritable bowel syndrome and the application in the general population

Por Mujagic, Zlatan, Tigchelaar, Ettje F., Zhernakova, Alexandra, Ludwig, Thomas, Ramiro-Garcia, Javier, Baranska, Agnieszka, Swertz, Morris A., Masclee, Ad A. M., Wijmenga, Cisca, van Schooten, Frederik J., Smolinska, Agnieszka, Jonkers, Daisy M. A. E.
Publicado no Sci Rep (2016)

Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

Por Versluis, Dennis, D’Andrea, Marco Maria, Ramiro Garcia, Javier, Leimena, Milkha M., Hugenholtz, Floor, Zhang, Jing, Öztürk, Başak, Nylund, Lotta, Sipkema, Detmer, Schaik, Willem van, de Vos, Willem M., Kleerebezem, Michiel, Smidt, Hauke, Passel, Mark W.J. van
Publicado no Sci Rep (2015)

Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential

Por Wampach, Linda, Heintz-Buschart, Anna, Fritz, Joëlle V., Ramiro-Garcia, Javier, Habier, Janine, Herold, Malte, Narayanasamy, Shaman, Kaysen, Anne, Hogan, Angela H., Bindl, Lutz, Bottu, Jean, Halder, Rashi, Sjöqvist, Conny, May, Patrick, Andersson, Anders F., de Beaufort, Carine, Wilmes, Paul
Publicado no Nat Commun (2018)