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New Insights into the Folding of a β-Sheet Miniprotein in a Reduced Space of Collective Hydrogen Bond Variables: Application to a Hydrodynamic Analysis of the Folding Flow

A new analysis of the 20 μs equilibrium folding/unfolding molecular dynamics simulations of the three-stranded antiparallel β-sheet miniprotein (beta3s) in implicit solvent is presented. The conformation space is reduced in dimensionality by introduction of linear combinations of hydrogen bond dista...

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Detalhes bibliográficos
Main Authors: Kalgin, Igor V., Caflisch, Amedeo, Chekmarev, Sergei F., Karplus, Martin
Formato: Artigo
Idioma:Inglês
Publicado em: 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3740565/
https://ncbi.nlm.nih.gov/pubmed/23621790
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/jp401742y
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