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CGAL: computing genome assembly likelihoods

Assembly algorithms have been extensively benchmarked using simulated data so that results can be compared to ground truth. However, in de novo assembly, only crude metrics such as contig number and size are typically used to evaluate assembly quality. We present CGAL, a novel likelihood-based appro...

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Bibliografiska uppgifter
Huvudupphovsmän: Rahman, Atif, Pachter, Lior
Materialtyp: Artigo
Språk:Inglês
Publicerad: BioMed Central 2013
Ämnen:
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC3663106/
https://ncbi.nlm.nih.gov/pubmed/23360652
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-1-r8
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