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CGAL: computing genome assembly likelihoods

Assembly algorithms have been extensively benchmarked using simulated data so that results can be compared to ground truth. However, in de novo assembly, only crude metrics such as contig number and size are typically used to evaluate assembly quality. We present CGAL, a novel likelihood-based appro...

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Bibliografiske detaljer
Main Authors: Rahman, Atif, Pachter, Lior
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2013
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3663106/
https://ncbi.nlm.nih.gov/pubmed/23360652
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-1-r8
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