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Fast and accurate read mapping with approximate seeds and multiple backtracking
We present Masai, a read mapper representing the state-of-the-art in terms of speed and accuracy. Our tool is an order of magnitude faster than RazerS 3 and mrFAST, 2–4 times faster and more accurate than Bowtie 2 and BWA. The novelties of our read mapper are filtration with approximate seeds and a...
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| Main Authors: | , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
Oxford University Press
2013
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3627565/ https://ncbi.nlm.nih.gov/pubmed/23358824 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkt005 |
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