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MaSC: mappability-sensitive cross-correlation for estimating mean fragment length of single-end short-read sequencing data

Motivation: Reliable estimation of the mean fragment length for next-generation short-read sequencing data is an important step in next-generation sequencing analysis pipelines, most notably because of its impact on the accuracy of the enriched regions identified by peak-calling algorithms. Although...

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Detalhes bibliográficos
Main Authors: Ramachandran, Parameswaran, Palidwor, Gareth A., Porter, Christopher J., Perkins, Theodore J.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3570216/
https://ncbi.nlm.nih.gov/pubmed/23300135
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btt001
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