VirusSeq: software to identify viruses and their integration sites using next-generation sequencing of human cancer tissue

Summary: We developed a new algorithmic method, VirusSeq, for detecting known viruses and their integration sites in the human genome using next-generation sequencing data. We evaluated VirusSeq on whole-transcriptome sequencing (RNA-Seq) data of 256 human cancer samples from The Cancer Genome Atlas...

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Autori principali: Chen, Yunxin, Yao, Hui, Thompson, Erika J., Tannir, Nizar M., Weinstein, John N., Su, Xiaoping
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2013
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Applications Note
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC3546792/
https://ncbi.nlm.nih.gov/pubmed/23162058
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/bts665
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