De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes

BACKGROUND: Molecular breeding of pepper (Capsicum spp.) can be accelerated by developing DNA markers associated with transcriptomes in breeding germplasm. Before the advent of next generation sequencing (NGS) technologies, the majority of sequencing data were generated by the Sanger sequencing meth...

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Main Authors: Ashrafi, Hamid, Hill, Theresa, Stoffel, Kevin, Kozik, Alexander, Yao, JiQiang, Chin-Wo, Sebastian Reyes, Van Deynze, Allen
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2012
Teme:
Research Article
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC3545863/
https://ncbi.nlm.nih.gov/pubmed/23110314
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-13-571
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