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De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes

BACKGROUND: Molecular breeding of pepper (Capsicum spp.) can be accelerated by developing DNA markers associated with transcriptomes in breeding germplasm. Before the advent of next generation sequencing (NGS) technologies, the majority of sequencing data were generated by the Sanger sequencing meth...

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Detalhes bibliográficos
Main Authors: Ashrafi, Hamid, Hill, Theresa, Stoffel, Kevin, Kozik, Alexander, Yao, JiQiang, Chin-Wo, Sebastian Reyes, Van Deynze, Allen
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3545863/
https://ncbi.nlm.nih.gov/pubmed/23110314
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-13-571
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