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A de novo next generation genomic sequence assembler based on string graph and MapReduce cloud computing framework

BACKGROUND: State-of-the-art high-throughput sequencers, e.g., the Illumina HiSeq series, generate sequencing reads that are longer than 150 bp up to a total of 600 Gbp of data per run. The high-throughput sequencers generate lengthier reads with greater sequencing depth than those generated by prev...

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Detalhes bibliográficos
Main Authors: Chang, Yu-Jung, Chen, Chien-Chih, Chen, Chuen-Liang, Ho, Jan-Ming
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3521391/
https://ncbi.nlm.nih.gov/pubmed/23282094
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-13-S7-S28
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