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Rotamer Optimization for Protein Design through MAP Estimation and Problem-Size Reduction

The search for the global minimum energy conformation (GMEC) of protein side chains is an important computational challenge in protein structure prediction and design. Using rotamer models, the problem is formulated as a NP-hard optimization problem. Dead-end elimination (DEE) methods combined with...

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Detalhes bibliográficos
Main Authors: Hong, Eun-Jong, Lippow, Shaun M., Tidor, Bruce, Lozano-Pérez, Tomás
Formato: Artigo
Idioma:Inglês
Publicado em: 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3495010/
https://ncbi.nlm.nih.gov/pubmed/19123203
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/jcc.21188
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