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MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

An important step in ‘metagenomics’ analysis is the assembly of multiple genomes from mixed sequence reads of multiple species in a microbial community. Most conventional pipelines use a single-genome assembler with carefully optimized parameters. A limitation of a single-genome assembler for de nov...

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Detalhes bibliográficos
Main Authors: Namiki, Toshiaki, Hachiya, Tsuyoshi, Tanaka, Hideaki, Sakakibara, Yasubumi
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3488206/
https://ncbi.nlm.nih.gov/pubmed/22821567
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gks678
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