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PairMotif: A New Pattern-Driven Algorithm for Planted (l, d) DNA Motif Search

Motif search is a fundamental problem in bioinformatics with an important application in locating transcription factor binding sites (TFBSs) in DNA sequences. The exact algorithms can report all (l, d) motifs and find the best one under a specific objective function. However, it is still a challengi...

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Detalhes bibliográficos
Main Authors: Yu, Qiang, Huo, Hongwei, Zhang, Yipu, Guo, Hongzhi
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3485246/
https://ncbi.nlm.nih.gov/pubmed/23119020
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0048442
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