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PairMotif: A New Pattern-Driven Algorithm for Planted (l, d) DNA Motif Search

Motif search is a fundamental problem in bioinformatics with an important application in locating transcription factor binding sites (TFBSs) in DNA sequences. The exact algorithms can report all (l, d) motifs and find the best one under a specific objective function. However, it is still a challengi...

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Bibliografiske detaljer
Main Authors: Yu, Qiang, Huo, Hongwei, Zhang, Yipu, Guo, Hongzhi
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2012
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3485246/
https://ncbi.nlm.nih.gov/pubmed/23119020
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0048442
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