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Rtips: fast and accurate tools for RNA 2D structure prediction using integer programming

We present a web-based tool set Rtips for fast and accurate prediction of RNA 2D complex structures. Rtips comprises two computational tools based on integer programming, IPknot for predicting RNA secondary structures with pseudoknots and RactIP for predicting RNA–RNA interactions with kissing hairp...

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Detalles Bibliográficos
Main Authors: Kato, Yuki, Sato, Kengo, Asai, Kiyoshi, Akutsu, Tatsuya
Formato: Artigo
Idioma:Inglês
Publicado: Oxford University Press 2012
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC3394313/
https://ncbi.nlm.nih.gov/pubmed/22600734
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gks412
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