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Exploiting sparseness in de novo genome assembly
BACKGROUND: The very large memory requirements for the construction of assembly graphs for de novo genome assembly limit current algorithms to super-computing environments. METHODS: In this paper, we demonstrate that constructing a sparse assembly graph which stores only a small fraction of the obse...
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| Main Authors: | , , , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BioMed Central
2012
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3369186/ https://ncbi.nlm.nih.gov/pubmed/22537038 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-13-S6-S1 |
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