i-rDNA: alignment-free algorithm for rapid in silico detection of ribosomal gene fragments from metagenomic sequence data sets

BACKGROUND: Obtaining accurate estimates of microbial diversity using rDNA profiling is the first step in most metagenomics projects. Consequently, most metagenomic projects spend considerable amounts of time, money and manpower for experimentally cloning, amplifying and sequencing the rDNA content...

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Bibliografiske detaljer
Main Authors: Mohammed, Monzoorul Haque, Ghosh, Tarini Shankar, Chadaram, Sudha, Mande, Sharmila S
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2011
Fag:
Proceedings
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3333171/
https://ncbi.nlm.nih.gov/pubmed/22369265
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-12-S3-S12
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