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graphite - a Bioconductor package to convert pathway topology to gene network

BACKGROUND: Gene set analysis is moving towards considering pathway topology as a crucial feature. Pathway elements are complex entities such as protein complexes, gene family members and chemical compounds. The conversion of pathway topology to a gene/protein networks (where nodes are a simple elem...

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Bibliografski detalji
Glavni autori: Sales, Gabriele, Calura, Enrica, Cavalieri, Duccio, Romualdi, Chiara
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2012
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3296647/
https://ncbi.nlm.nih.gov/pubmed/22292714
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-13-20
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