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Probabilistic Inference for Nucleosome Positioning with MNase-Based or Sonicated Short-Read Data
We describe a model-based method, PING, for predicting nucleosome positions in MNase-Seq and MNase- or sonicated-ChIP-Seq data. PING compares favorably to NPS and TemplateFilter in scalability, accuracy and robustness to low read density. To demonstrate that PING predictions from widely available so...
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| Hlavní autoři: | , , , , |
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| Médium: | Artigo |
| Jazyk: | Inglês |
| Vydáno: |
Public Library of Science
2012
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| Témata: | |
| On-line přístup: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3290535/ https://ncbi.nlm.nih.gov/pubmed/22393380 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0032095 |
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