deepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns

Motivation: High-throughput sequencing methods allow whole transcriptomes to be sequenced fast and cost-effectively. Short RNA sequencing provides not only quantitative expression data but also an opportunity to identify novel coding and non-coding RNAs. Many long transcripts undergo post-transcript...

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Bibliographic Details
Main Authors: Langenberger, David, Pundhir, Sachin, Ekstrøm, Claus T., Stadler, Peter F., Hoffmann, Steve, Gorodkin, Jan
Format: Artigo
Language:Inglês
Published: Oxford University Press 2012
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Original Papers
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC3244762/
https://ncbi.nlm.nih.gov/pubmed/22053076
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btr598
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