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SNIT: SNP identification for strain typing

With ever-increasing numbers of microbial genomes being sequenced, efficient tools are needed to perform strain-level identification of any newly sequenced genome. Here, we present the SNP identification for strain typing (SNIT) pipeline, a fast and accurate software system that compares a newly seq...

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Hlavní autoři: Vijaya Satya, Ravi, Zavaljevski, Nela, Reifman, Jaques
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2011
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3182885/
https://ncbi.nlm.nih.gov/pubmed/21902825
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1751-0473-6-14
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