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Stiffness detection and reduction in discrete stochastic simulation of biochemical systems

Typical multiscale biochemical models contain fast-scale and slow-scale reactions, where “fast” reactions fire much more frequently than “slow” ones. This feature often causes stiffness in discrete stochastic simulation methods such as Gillespie’s algorithm and the Tau-Leaping method leading to inef...

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Detalles Bibliográficos
Main Authors: Pu, Yang, Watson, Layne T., Cao, Yang
Formato: Artigo
Idioma:Inglês
Publicado: American Institute of Physics 2011
Assuntos:
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC3045418/
https://ncbi.nlm.nih.gov/pubmed/21303090
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.3548838
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