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A genome alignment algorithm based on compression

BACKGROUND: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of the two sequences. They are often computationally expensive and unable to deal with low information regions. Furthermore, t...

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Autors principals: Cao, Minh Duc, Dix, Trevor I, Allison, Lloyd
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2010
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC3022628/
https://ncbi.nlm.nih.gov/pubmed/21159205
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-11-599
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