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A genome alignment algorithm based on compression

BACKGROUND: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of the two sequences. They are often computationally expensive and unable to deal with low information regions. Furthermore, t...

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Detalhes bibliográficos
Main Authors: Cao, Minh Duc, Dix, Trevor I, Allison, Lloyd
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2010
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3022628/
https://ncbi.nlm.nih.gov/pubmed/21159205
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-11-599
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