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Model-based method for transcription factor target identification with limited data

We present a computational method for identifying potential targets of a transcription factor (TF) using wild-type gene expression time series data. For each putative target gene we fit a simple differential equation model of transcriptional regulation, and the model likelihood serves as a score to...

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Detalhes bibliográficos
Main Authors: Honkela, Antti, Girardot, Charles, Gustafson, E. Hilary, Liu, Ya-Hsin, Furlong, Eileen E. M., Lawrence, Neil D., Rattray, Magnus
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2010
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Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2867914/
https://ncbi.nlm.nih.gov/pubmed/20385836
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.0914285107
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