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Atomistic understanding of kinetic pathways for single base-pair binding and unbinding in DNA

We combine free-energy calculations and molecular dynamics to elucidate a mechanism for DNA base-pair binding and unbinding in atomic detail. Specifically, transition-path sampling is used to overcome computational limitations associated with conventional techniques to harvest many trajectories for...

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Bibliographische Detailangaben
Veröffentlicht in:Proc Natl Acad Sci U S A
Hauptverfasser: Hagan, Michael F., Dinner, Aaron R., Chandler, David, Chakraborty, Arup K.
Format: Artigo
Sprache:Inglês
Veröffentlicht: National Academy of Sciences 2003
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.govhttps://pmc.ncbi.nlm.nih.gov/articles/PMC283522/
https://ncbi.nlm.nih.govhttps://pubmed.ncbi.nlm.nih.gov/14617777/
https://ncbi.nlm.nih.govhttps://doi.org/10.1073/pnas.2036378100
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