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A Novel Alignment-Free Method for Comparing Transcription Factor Binding Site Motifs

BACKGROUND: Transcription factor binding site (TFBS) motifs can be accurately represented by position frequency matrices (PFM) or other equivalent forms. We often need to compare TFBS motifs using their PFMs in order to search for similar motifs in a motif database, or cluster motifs according to th...

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Detalhes bibliográficos
Main Authors: Xu, Minli, Su, Zhengchang
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2010
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2808352/
https://ncbi.nlm.nih.gov/pubmed/20098703
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0008797
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