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Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution

We present a whole-proteome phylogeny of prokaryotes constructed by comparing feature frequency profiles (FFPs) of whole proteomes. Features are l-mers of amino acids, and each organism is represented by a profile of frequencies of all features. The selection of feature length is critical in the FFP...

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Wedi'i Gadw mewn:
Manylion Llyfryddiaeth
Prif Awduron: Jun, Se-Ran, Sims, Gregory E., Wu, Guohong A., Kim, Sung-Hou
Fformat: Artigo
Iaith:Inglês
Cyhoeddwyd: National Academy of Sciences 2009
Pynciau:
Mynediad Ar-lein:https://ncbi.nlm.nih.gov/pmc/articles/PMC2806744/
https://ncbi.nlm.nih.gov/pubmed/20018669
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.0913033107
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