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Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimation

Accurate free energy estimation is essential for RNA structure prediction. The widely used Turner's energy model works well for nested structures. For pseudoknotted RNAs, however, there is no effective rule for estimation of loop entropy and free energy. In this work we present a new free energ...

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Detalhes bibliográficos
Main Authors: Zhang, Jian, Dundas, Joseph, Lin, Ming, Chen, Rong, Wang, Wei, Liang, Jie
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2009
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2779689/
https://ncbi.nlm.nih.gov/pubmed/19864433
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.1723609
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