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Predicting gene targets of perturbations via network-based filtering of mRNA expression compendia

Motivation: DNA microarrays are routinely applied to study diseased or drug-treated cell populations. A critical challenge is distinguishing the genes directly affected by these perturbations from the hundreds of genes that are indirectly affected. Here, we developed a sparse simultaneous equation m...

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Detalhes bibliográficos
Main Authors: Cosgrove, Elissa J., Zhou, Yingchun, Gardner, Timothy S., Kolaczyk, Eric D.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2732281/
https://ncbi.nlm.nih.gov/pubmed/18779235
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btn476
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