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Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis

BACKGROUND: Reliable annotation linking oligonucleotide probes to target genes is essential for functional biological analysis of microarray experiments. We used the IMAD, OligoRAP and sigReannot pipelines to update the annotation for the ARK-Genomics Chicken 20 K array as part of a joined EADGENE/S...

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書誌詳細
主要な著者: Neerincx, Pieter BT, Casel, Pierrot, Prickett, Dennis, Nie, Haisheng, Watson, Michael, Leunissen, Jack AM, Groenen, Martien AM, Klopp, Christophe
フォーマット: Artigo
言語:Inglês
出版事項: BioMed Central 2009
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC2712739/
https://ncbi.nlm.nih.gov/pubmed/19615109
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1753-6561-3-S4-S1
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