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Constructing RNA dynamical ensembles by combining MD and motionally decoupled NMR RDCs: new insights into RNA dynamics and adaptive ligand recognition

We describe a strategy for constructing atomic resolution dynamical ensembles of RNA molecules, spanning up to millisecond timescales, that combines molecular dynamics (MD) simulations with NMR residual dipolar couplings (RDC) measured in elongated RNA. The ensembles are generated via a Monte Carlo...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Frank, Aaron T., Stelzer, Andrew C., Al-Hashimi, Hashim M., Andricioaei, Ioan
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2009
Schlagworte:
RNA
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2699496/
https://ncbi.nlm.nih.gov/pubmed/19369218
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkp156
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