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Kinetic Monte Carlo Method for Rule-based Modeling of Biochemical Networks

We present a kinetic Monte Carlo method for simulating chemical transformations specified by reaction rules, which can be viewed as generators of chemical reactions, or equivalently, definitions of reaction classes. A rule identifies the molecular components involved in a transformation, how these c...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Yang, Jin, Monine, Michael I., Faeder, James R., Hlavacek, William S.
Format: Artigo
Sprache:Inglês
Veröffentlicht: 2008
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2652652/
https://ncbi.nlm.nih.gov/pubmed/18851068
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