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Prediction of RNA secondary structure with pseudoknots using integer programming

BACKGROUND: RNA secondary structure prediction is one major task in bioinformatics, and various computational methods have been proposed so far. Pseudoknot is one of the typical substructures appearing in several RNAs, and plays an important role in some biological processes. Prediction of RNA secon...

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Autori principali: Poolsap, Unyanee, Kato, Yuki, Akutsu, Tatsuya
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2009
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC2648744/
https://ncbi.nlm.nih.gov/pubmed/19208139
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S38
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