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Discovering gapped binding sites of yeast transcription factors

A gapped transcription factor-binding site (TFBS) contains one or more highly degenerate positions. Discovering gapped motifs is difficult, because allowing highly degenerate positions in a motif greatly enlarges the search space and complicates the discovery process. Here, we propose a method for d...

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Detalhes bibliográficos
Main Authors: Chen, Chien-Yu, Tsai, Huai-Kuang, Hsu, Chen-Ming, May Chen, Mei-Ju, Hung, Hao-Geng, Huang, Grace Tzu-Wei, Li, Wen-Hsiung
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2268170/
https://ncbi.nlm.nih.gov/pubmed/18272477
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.0712188105
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