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Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities

BACKGROUND: Identification of RNA homologs within genomic stretches is difficult when pairwise sequence identity is low or unalignable flanking residues are present. In both cases structure-sequence or profile/family-sequence alignment programs become difficult to apply because of unreliable RNA str...

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Bibliografiske detaljer
Main Authors: Roshan, Usman, Chikkagoudar, Satish, Livesay, Dennis R
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2008
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2248559/
https://ncbi.nlm.nih.gov/pubmed/18226231
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-9-61
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