Using Growing Self-Organising Maps to Improve the Binning Process in Environmental Whole-Genome Shotgun Sequencing

Metagenomic projects using whole-genome shotgun (WGS) sequencing produces many unassembled DNA sequences and small contigs. The step of clustering these sequences, based on biological and molecular features, is called binning. A reported strategy for binning that combines oligonucleotide frequency a...

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Detalhes bibliográficos
Main Authors: Chan, Chon-Kit Kenneth, Hsu, Arthur L., Tang, Sen-Lin, Halgamuge, Saman K.
Formato: Artigo
Idioma:Inglês
Publicado em: Hindawi Publishing Corporation 2008
Assuntos:
Methodology Report
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC2235928/
https://ncbi.nlm.nih.gov/pubmed/18288261
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1155/2008/513701
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