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Conrad: Gene prediction using conditional random fields

We present Conrad, the first comparative gene predictor based on semi-Markov conditional random fields (SMCRFs). Unlike the best standalone gene predictors, which are based on generalized hidden Markov models (GHMMs) and trained by maximum likelihood, Conrad is discriminatively trained to maximize a...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: DeCaprio, David, Vinson, Jade P., Pearson, Matthew D., Montgomery, Philip, Doherty, Matthew, Galagan, James E.
Format: Artigo
Sprache:Inglês
Veröffentlicht: Cold Spring Harbor Laboratory Press 2007
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1950907/
https://ncbi.nlm.nih.gov/pubmed/17690204
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.6558107
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