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HHrep: de novo protein repeat detection and the origin of TIM barrels

HHrep is a web server for the de novo identification of repeats in protein sequences, which is based on the pairwise comparison of profile hidden Markov models (HMMs). Its main strength is its sensitivity, allowing it to detect highly divergent repeat units in protein sequences whose repeats could a...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Hauptverfasser: Söding, Johannes, Remmert, Michael, Biegert, Andreas
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2006
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1538828/
https://ncbi.nlm.nih.gov/pubmed/16844977
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkl130
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