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Gaussian-Weighted RMSD Superposition of Proteins: A Structural Comparison for Flexible Proteins and Predicted Protein Structures

Many proteins contain flexible structures such as loops and hinged domains. A simple root mean square deviation (RMSD) alignment of two different conformations of the same protein can be skewed by the difference between the mobile regions. To overcome this problem, we have developed a novel method t...

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Autors principals: Damm, Kelly L., Carlson, Heather A.
Format: Artigo
Idioma:Inglês
Publicat: Biophysical Society 2006
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC1471868/
https://ncbi.nlm.nih.gov/pubmed/16565070
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1529/biophysj.105.066654
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