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A comparison of profile hidden Markov model procedures for remote homology detection

Profile hidden Markov models (HMMs) are amongst the most successful procedures for detecting remote homology between proteins. There are two popular profile HMM programs, HMMER and SAM. Little is known about their performance relative to each other and to the recently improved version of PSI-BLAST....

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Podrobná bibliografie
Vydáno v:Nucleic Acids Res
Hlavní autoři: Madera, Martin, Gough, Julian
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2002
Témata:
On-line přístup:https://ncbi.nlm.nih.govhttps://pmc.ncbi.nlm.nih.gov/articles/PMC140544/
https://ncbi.nlm.nih.govhttps://pubmed.ncbi.nlm.nih.gov/12364612/
https://ncbi.nlm.nih.govhttps://doi.org/10.1093/nar/gkf544
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