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A comparison of profile hidden Markov model procedures for remote homology detection

Profile hidden Markov models (HMMs) are amongst the most successful procedures for detecting remote homology between proteins. There are two popular profile HMM programs, HMMER and SAM. Little is known about their performance relative to each other and to the recently improved version of PSI-BLAST....

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Detalhes bibliográficos
Main Authors: Madera, Martin, Gough, Julian
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2002
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC140544/
https://ncbi.nlm.nih.gov/pubmed/12364612
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