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Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization

A partition function calculation for RNA secondary structure is presented that uses a current set of nearest neighbor parameters for conformational free energy at 37°C, including coaxial stacking. For a diverse database of RNA sequences, base pairs in the predicted minimum free energy structure that...

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Wedi'i Gadw mewn:
Manylion Llyfryddiaeth
Prif Awdur: MATHEWS, DAVID H.
Fformat: Artigo
Iaith:Inglês
Cyhoeddwyd: Copyright 2004 by RNA Society 2004
Pynciau:
Mynediad Ar-lein:https://ncbi.nlm.nih.gov/pmc/articles/PMC1370608/
https://ncbi.nlm.nih.gov/pubmed/15272118
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.7650904
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