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A structure-based method for derivation of all-atom potentials for protein folding

A method for deriving all-atom protein folding potentials is presented and tested on a three-helix bundle protein, as well as on hairpin and helical sequences. The potentials obtained are composed of a contact term between pairs of atoms, and a local density term for each atom, mimicking solvent exp...

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Veröffentlicht in:Proc Natl Acad Sci U S A
Hauptverfasser: Kussell, Edo, Shimada, Jun, Shakhnovich, Eugene I.
Format: Artigo
Sprache:Inglês
Veröffentlicht: National Academy of Sciences 2002
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Online-Zugang:https://ncbi.nlm.nih.govhttps://pmc.ncbi.nlm.nih.gov/articles/PMC122771/
https://ncbi.nlm.nih.govhttps://pubmed.ncbi.nlm.nih.gov/11943859/
https://ncbi.nlm.nih.govhttps://doi.org/10.1073/pnas.072665799
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