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Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens

Abstract Background To reduce the cost of genomic selection, a low-density (LD) single nucleotide polymorphism (SNP) chip can be used in combination with imputation for genotyping selection candidates instead of using a high-density (HD) SNP chip. Next-generation sequencing (NGS) techniques have bee...

Ausführliche Beschreibung

Gespeichert in:
Hauptverfasser: Florian Herry, Frédéric Hérault, Frédéric Lecerf, Laëtitia Lagoutte, Mathilde Doublet, David Picard-Druet, Philippe Bardou, Amandine Varenne, Thierry Burlot, Pascale Le Roy, Sophie Allais
Format: Artigo
Sprache:Inglês
Veröffentlicht: BMC 2023-05-01
Schriftenreihe:BMC Genomics
Schlagworte:
Genomic selection
Layer chicken
Low-density panel
Imputation accuracy
Genomic evaluation accuracy
NGS
Online-Zugang:https://doi.org/10.1186/s12864-023-09321-5
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