Uncovering the multi-layer cis-regulatory landscape of rice via integrative nascent RNA analysis

Abstract Background Efforts to characterize regulatory elements in plant genomes traditionally rely on evolutionary conservation and chromatin accessibility. Recently, intergenic bi-directional nascent transcript has emerged as a putative hallmark of active enhancers. Here, we integrate these approa...

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Autores principales:	Marina Goliasse, Aurore Johary, Adrian E. Platts, Fabian Ortner-Krause, Patrick P. Edger, Jae Young Choi, Michael D. Purugganan, Zoé Joly-Lopez
Formato:	Artigo
Lenguaje:	Inglês
Publicado:	BMC 2025-08-01
Colección:	Genome Biology
Materias:	Gene regulation cis-regulatory elements Functional genomics Transposable elements Transcribed enhancers Conserved noncoding sequences
Acceso en línea:	https://doi.org/10.1186/s13059-025-03715-2
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