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Wochenende — modular and flexible alignment-based shotgun metagenome analysis

Abstract Background Shotgun metagenome analysis provides a robust and verifiable method for comprehensive microbiome analysis of fungal, viral, archaeal and bacterial taxonomy, particularly with regard to visualization of read mapping location, normalization options, growth dynamics and functional g...

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Autores principales: Ilona Rosenboom, Tobias Scheithauer, Fabian C. Friedrich, Sophia Pörtner, Lisa Hollstein, Marie-Madlen Pust, Konstantinos Sifakis, Tom Wehrbein, Bodo Rosenhahn, Lutz Wiehlmann, Patrick Chhatwal, Burkhard Tümmler, Colin F. Davenport
Formato: Artigo
Lenguaje:Inglês
Publicado: BMC 2022-11-01
Colección:BMC Genomics
Materias:
Metagenomics
Genomics
Absolute quantification
Metagenomic visualization
Long-read metagenomics
Acceso en línea:https://doi.org/10.1186/s12864-022-08985-9
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