PG-SCUnK: measuring pangenome graph representativeness using single-copy and universal K-mers

Abstract Background Pangenome graphs integrate multiple assemblies to represent non-redundant genetic diversity. However, current evaluations of pangenome graphs rely primarily on technical parameters (e.g., total length, number of nodes/edges, growth curves), which fail to assess how effectively th...

全面介紹

書目詳細資料

Principais autores:	Tristan Cumer, Sotiria Milia, Alexander S. Leonard, Hubert Pausch
格式:	Artigo
語言:	Inglês
出版:	BMC 2025-12-01
叢編:	BMC Bioinformatics
主題:	Pangenome graphs Single-copy k-mers Universal k-mers Graph representativeness Graph quality assessment
在線閱讀:	https://doi.org/10.1186/s12859-025-06355-2
標簽:	添加標簽 沒有標簽, 成為第一個標記此記錄!