Context-aware seeds for read mapping
Abstract Motivation Most modern seed-and-extend NGS read mappers employ a seeding scheme that requires extracting t non-overlapping seeds in each read in order to find all valid mappings under an edit distance threshold of t. As t grows, this seeding scheme forces mappers to use more and shorter see...
Gorde:
| Egile Nagusiak: | , , |
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| Formatua: | Artigo |
| Hizkuntza: | Inglês |
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BMC
2020-05-01
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| Saila: | Algorithms for Molecular Biology |
| Gaiak: | |
| Sarrera elektronikoa: | http://link.springer.com/article/10.1186/s13015-020-00172-3 |
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