Strobealign: flexible seed size enables ultra-fast and accurate read alignment
Abstract Read alignment is often the computational bottleneck in analyses. Recently, several advances have been made on seeding methods for fast sequence comparison. We combine two such methods, syncmers and strobemers, in a novel seeding approach for constructing dynamic-sized fuzzy seeds and imple...
Kaydedildi:
| Yazar: | |
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| Materyal Türü: | Artigo |
| Dil: | Inglês |
| Baskı/Yayın Bilgisi: |
BMC
2022-12-01
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| Seri Bilgileri: | Genome Biology |
| Konular: | |
| Online Erişim: | https://doi.org/10.1186/s13059-022-02831-7 |
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